Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgcs1Q8JZK9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm14767-201ENSMUST00000121559 586 ntBASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm27680-201ENSMUST00000184192 160 ntBASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm27321-201ENSMUST00000185021 205 ntBASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgcs1Q8JZK9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Gm13223-201ENSMUST00000118609 747 ntBASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgcs1Q8JZK9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgcs1Q8JZK9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgcs1Q8JZK9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgcs1Q8JZK9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgcs1Q8JZK9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.91□□□□□ -0.34
Hmgcs1Q8JZK9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms