Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfwd3Q8CIK8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm5354-201ENSMUST00000182417 973 ntBASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfwd3Q8CIK8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Gm28631-201ENSMUST00000190740 334 ntBASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfwd3Q8CIK8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms