Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Gm8515-201ENSMUST00000194852 576 ntBASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Gm6745-201ENSMUST00000199216 526 ntBASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Gm9908-201ENSMUST00000211534 448 ntBASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc60Q8C4J0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc60Q8C4J0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc60Q8C4J0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gm7063-201ENSMUST00000186840 981 ntBASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gm42550-201ENSMUST00000201553 960 ntBASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms