Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm15371-201ENSMUST00000117057 784 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm23984-201ENSMUST00000157139 203 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm8463-201ENSMUST00000208573 613 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Gm9908-201ENSMUST00000211534 448 ntBASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp44Q8C2S0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm45384-201ENSMUST00000210451 277 ntBASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms