Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Mir686-201ENSMUST00000102174 109 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Mir7070-201ENSMUST00000183657 86 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm10608-202ENSMUST00000213924 676 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ptcd1Q8C2E4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Gm29396-201ENSMUST00000185659 716 ntBASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Gm37259-201ENSMUST00000193903 849 ntBASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ptcd1Q8C2E4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Mir698-201ENSMUST00000102164 109 ntBASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Gm25927-201ENSMUST00000175058 117 ntBASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.61■□□□□ 0.25
Ptcd1Q8C2E4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms