Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Itm2b-204ENSMUST00000228637 783 ntBASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm11425-201ENSMUST00000119608 498 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm9396-201ENSMUST00000076703 567 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm26315-201ENSMUST00000083890 321 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap1Q8BTW8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms