Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm11543-201ENSMUST00000120758 370 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Mir3113-201ENSMUST00000175478 76 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Mir8117-201ENSMUST00000184773 107 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm44492-201ENSMUST00000197012 141 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fam78bQ8BQN5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Fam78bQ8BQN5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Fam78bQ8BQN5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fam78bQ8BQN5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fam78bQ8BQN5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms