Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2bQ8BJF9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2bQ8BJF9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp2bQ8BJF9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms