Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.08□□□□□ -0.32
Trim36Q80WG7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.08□□□□□ -0.32
Trim36Q80WG7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Grk6-205ENSMUST00000224653 2976 ntBASIC13.08□□□□□ -0.32
Trim36Q80WG7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim36Q80WG7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.07□□□□□ -0.32
Trim36Q80WG7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.07□□□□□ -0.32
Trim36Q80WG7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.07□□□□□ -0.32
Trim36Q80WG7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim36Q80WG7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms