Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm38223-201ENSMUST00000194484 695 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm8463-201ENSMUST00000208573 613 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh8Q7TSK3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms