Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.19□□□□□ -0.3
Ubfd1Q78JW9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubfd1Q78JW9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ubfd1Q78JW9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gm24644-201ENSMUST00000157114 139 ntBASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ubfd1Q78JW9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm13226-201ENSMUST00000117838 404 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm10156-201ENSMUST00000122364 462 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm29127-201ENSMUST00000188304 517 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Gm8598-201ENSMUST00000221184 836 ntBASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubfd1Q78JW9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Proscos-202ENSMUST00000178990 666 ntBASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubfd1Q78JW9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms