Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm12485-201ENSMUST00000119641 291 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm24447-201ENSMUST00000083977 338 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timd4Q6U7R4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Timd4Q6U7R4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Timd4Q6U7R4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm15678-201ENSMUST00000117573 960 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Mir7654-201ENSMUST00000185082 70 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm18018-201ENSMUST00000198273 408 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm7653-201ENSMUST00000214567 508 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timd4Q6U7R4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Matn2-206ENSMUST00000228570 2798 ntBASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Timd4Q6U7R4 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.57□□□□□ -0.4
Timd4Q6U7R4 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.57□□□□□ -0.4
Timd4Q6U7R4 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms