Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm8927-201ENSMUST00000181978 981 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm3222-201ENSMUST00000071282 990 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scaf4Q6PFF0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm25287-201ENSMUST00000103846 110 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm22918-201ENSMUST00000103855 110 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm33320-201ENSMUST00000192232 530 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scaf4Q6PFF0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scaf4Q6PFF0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scaf4Q6PFF0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scaf4Q6PFF0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scaf4Q6PFF0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Gm14494-201ENSMUST00000118786 435 ntBASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Gm13365-201ENSMUST00000121188 973 ntBASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms