Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop58Q6DFW4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 AA543401-201ENSMUST00000164248 1269 ntBASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Gm17968-201ENSMUST00000194902 784 ntBASIC18.62■□□□□ 0.57
Nop58Q6DFW4 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.62■□□□□ 0.57
Nop58Q6DFW4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Paupar-201ENSMUST00000194826 3482 ntBASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop58Q6DFW4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm29310-201ENSMUST00000185468 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21825-201ENSMUST00000185728 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm29109-201ENSMUST00000185895 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21896-201ENSMUST00000186520 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21873-201ENSMUST00000186728 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21794-201ENSMUST00000187056 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21880-201ENSMUST00000187275 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21826-201ENSMUST00000187451 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21198-201ENSMUST00000188393 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21749-201ENSMUST00000189343 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21901-201ENSMUST00000189568 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm29424-201ENSMUST00000189716 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm28599-201ENSMUST00000189838 694 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21867-201ENSMUST00000189917 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm29269-201ENSMUST00000190087 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21722-201ENSMUST00000190153 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm28423-201ENSMUST00000190701 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21899-201ENSMUST00000190745 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21910-201ENSMUST00000191163 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21849-201ENSMUST00000191571 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm28678-201ENSMUST00000191593 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm20910-201ENSMUST00000193268 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm21871-201ENSMUST00000194621 696 ntBASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop58Q6DFW4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gm6973-201ENSMUST00000117080 721 ntBASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gm11452-201ENSMUST00000122376 690 ntBASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Ank2-226ENSMUST00000189368 339 ntBASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nop58Q6DFW4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms