Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm46209-201ENSMUST00000217912 553 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm9229-201ENSMUST00000222777 126 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.1□□□□□ -0.79
Foxc1Q61572 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm11652-201ENSMUST00000117842 1267 ntBASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm13059-201ENSMUST00000119881 398 ntBASIC10.1□□□□□ -0.79
Foxc1Q61572 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Foxc1Q61572 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm38262-201ENSMUST00000194760 1382 ntBASIC10.1□□□□□ -0.79
Foxc1Q61572 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Gm37863-201ENSMUST00000194911 1457 ntBASIC10.1□□□□□ -0.79
Foxc1Q61572 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.1□□□□□ -0.79
Foxc1Q61572 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Foxc1Q61572 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm12001-201ENSMUST00000121727 913 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms