Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sim2Q61079 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sim2Q61079 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.19□□□□□ -0.3
Sim2Q61079 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sim2Q61079 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Efs-202ENSMUST00000227037 2540 ntBASIC13.18□□□□□ -0.3
Sim2Q61079 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.18□□□□□ -0.3
Sim2Q61079 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.18□□□□□ -0.3
Sim2Q61079 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.18□□□□□ -0.3
Sim2Q61079 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sim2Q61079 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.18□□□□□ -0.3
Sim2Q61079 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Sim2Q61079 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sim2Q61079 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.18□□□□□ -0.3
Sim2Q61079 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sim2Q61079 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sim2Q61079 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Gm11591-201ENSMUST00000120063 702 ntBASIC13.17□□□□□ -0.3
Sim2Q61079 Gm2231-201ENSMUST00000125661 612 ntBASIC13.17□□□□□ -0.3
Sim2Q61079 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.17□□□□□ -0.3
Sim2Q61079 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.17□□□□□ -0.3
Sim2Q61079 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.17□□□□□ -0.3
Sim2Q61079 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.17□□□□□ -0.3
Sim2Q61079 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.17□□□□□ -0.3
Sim2Q61079 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sim2Q61079 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sim2Q61079 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sim2Q61079 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sim2Q61079 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sim2Q61079 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms