Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Gm40466-201ENSMUST00000212174 422 ntBASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.78■□□□□ 0.12
Prpf38aQ4FK66 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Gm45841-201ENSMUST00000207700 164 ntBASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Gm29705-201ENSMUST00000212598 474 ntBASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38aQ4FK66 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38aQ4FK66 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm12203-201ENSMUST00000118235 598 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm12209-201ENSMUST00000120089 596 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm37424-201ENSMUST00000191727 561 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38aQ4FK66 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms