Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Nudt18-202ENSMUST00000228554 3619 ntBASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc27Q3V036 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Mir449b-201ENSMUST00000104833 80 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Gm26308-201ENSMUST00000157768 69 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Gm16476-201ENSMUST00000221544 139 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Dupd1-202ENSMUST00000224735 548 ntBASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc27Q3V036 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Gm26616-202ENSMUST00000195676 3107 ntBASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ccdc27Q3V036 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.27■□□□□ 0.35
Ccdc27Q3V036 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Gm7774-201ENSMUST00000200064 533 ntBASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc27Q3V036 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Gm24543-201ENSMUST00000103867 82 ntBASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Gm15693-201ENSMUST00000120470 637 ntBASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.25■□□□□ 0.35
Ccdc27Q3V036 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc27Q3V036 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms