Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Gm27989-201ENSMUST00000184721 107 ntBASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Gm9522-201ENSMUST00000182394 926 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Mir8102-201ENSMUST00000184148 139 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Brf2Q3UAW9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gm15920-201ENSMUST00000118998 402 ntBASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Gm20445-201ENSMUST00000061905 565 ntBASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms