Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf149Q3U2C5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gm13616-201ENSMUST00000120600 222 ntBASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gm5779-201ENSMUST00000218467 910 ntBASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf149Q3U2C5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm8410-201ENSMUST00000117225 605 ntBASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf149Q3U2C5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.15□□□□□ -0.46
Rnf149Q3U2C5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms