Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm15165-201ENSMUST00000118140 502 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccbe1Q3MI99 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Gm18489-201ENSMUST00000172565 551 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms