Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22065-201ENSMUST00000103753 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22066-201ENSMUST00000103761 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24932-201ENSMUST00000103763 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24115-201ENSMUST00000103799 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22190-201ENSMUST00000103827 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22191-201ENSMUST00000103831 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24721-201ENSMUST00000103849 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm28018-201ENSMUST00000103869 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm26399-201ENSMUST00000103937 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25349-201ENSMUST00000177728 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm23616-201ENSMUST00000177797 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25871-201ENSMUST00000177816 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24752-201ENSMUST00000178240 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24496-201ENSMUST00000178287 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25649-201ENSMUST00000178476 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25548-201ENSMUST00000178681 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm23147-201ENSMUST00000178841 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm26095-201ENSMUST00000179270 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22171-201ENSMUST00000179283 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm23936-201ENSMUST00000179354 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm22619-201ENSMUST00000179516 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25255-201ENSMUST00000179579 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24755-201ENSMUST00000179691 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm26506-201ENSMUST00000179692 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm25086-201ENSMUST00000179931 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm23243-201ENSMUST00000180047 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24659-201ENSMUST00000180212 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm24169-201ENSMUST00000180244 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm23689-201ENSMUST00000180354 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm27359-201ENSMUST00000184153 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm27785-201ENSMUST00000184268 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm27466-201ENSMUST00000184396 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gm27703-201ENSMUST00000184836 110 ntBASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm13823-201ENSMUST00000119930 345 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.07□□□□□ -0.32
Ptchd3Q0EEE2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms