Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Gm15393-201ENSMUST00000120499 219 ntBASIC10.48□□□□□ -0.73
Cdx4Q07424 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Gm33320-201ENSMUST00000192232 530 ntBASIC10.48□□□□□ -0.73
Cdx4Q07424 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.48□□□□□ -0.73
Cdx4Q07424 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.48□□□□□ -0.73
Cdx4Q07424 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdx4Q07424 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx4Q07424 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm12859-201ENSMUST00000117834 427 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm15321-201ENSMUST00000121290 288 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm43703-201ENSMUST00000200523 763 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.47□□□□□ -0.73
Cdx4Q07424 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cdx4Q07424 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx4Q07424 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms