Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm27046-201ENSMUST00000182160 463 ntBASIC9.7□□□□□ -0.86
Hspg2Q05793 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Gm37042-201ENSMUST00000193816 581 ntBASIC9.7□□□□□ -0.86
Hspg2Q05793 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.7□□□□□ -0.86
Hspg2Q05793 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.7□□□□□ -0.86
Hspg2Q05793 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.7□□□□□ -0.86
Hspg2Q05793 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hspg2Q05793 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm26185-201ENSMUST00000157692 266 ntBASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.69□□□□□ -0.86
Hspg2Q05793 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm2546-201ENSMUST00000182630 991 ntBASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm9211-201ENSMUST00000182882 975 ntBASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Hspg2Q05793 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hspg2Q05793 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.68□□□□□ -0.86
Hspg2Q05793 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm42918-201ENSMUST00000199249 1580 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm7666-201ENSMUST00000146631 819 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm38210-201ENSMUST00000191944 809 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.68□□□□□ -0.86
Hspg2Q05793 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Spcs1-203ENSMUST00000226374 592 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm12620-201ENSMUST00000119791 1986 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm12612-201ENSMUST00000140182 1986 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm16397-201ENSMUST00000122201 494 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Gm19459-201ENSMUST00000176240 835 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Arhgef33-207ENSMUST00000224966 490 ntBASIC9.68□□□□□ -0.86
Hspg2Q05793 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
Hspg2Q05793 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms