Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm12403-201ENSMUST00000121384 959 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm44719-201ENSMUST00000206404 149 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col6a2Q02788 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col6a2Q02788 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.51□□□□□ -0.25
Col6a2Q02788 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a2Q02788 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Col6a2Q02788 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Acot6-202ENSMUST00000222921 3622 ntBASIC13.5□□□□□ -0.25
Col6a2Q02788 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm8652-201ENSMUST00000181363 964 ntBASIC13.5□□□□□ -0.25
Col6a2Q02788 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.5□□□□□ -0.25
Col6a2Q02788 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.5□□□□□ -0.25
Col6a2Q02788 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a2Q02788 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a2Q02788 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.49□□□□□ -0.25
Col6a2Q02788 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a2Q02788 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms