Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC8.95□□□□□ -0.98
PrkdcP97313 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm42941-201ENSMUST00000200347 1321 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm12501-201ENSMUST00000119163 529 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm13022-201ENSMUST00000121181 285 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm19187-201ENSMUST00000206781 892 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm39404-201ENSMUST00000216350 313 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm19994-201ENSMUST00000217086 586 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC8.95□□□□□ -0.98
PrkdcP97313 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC8.95□□□□□ -0.98
PrkdcP97313 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
PrkdcP97313 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm21998-201ENSMUST00000117552 1308 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm5340-201ENSMUST00000203733 880 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm40879-201ENSMUST00000220759 612 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm9873-201ENSMUST00000063891 1097 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm11979-201ENSMUST00000119629 743 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC8.95□□□□□ -0.98
PrkdcP97313 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm42518-201ENSMUST00000196277 938 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm8018-201ENSMUST00000173536 789 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC8.94□□□□□ -0.98
PrkdcP97313 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm5733-201ENSMUST00000190232 939 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm13668-201ENSMUST00000119237 1001 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm6397-201ENSMUST00000161973 1069 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PrkdcP97313 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.94□□□□□ -0.98
PrkdcP97313 AC153505.1-201ENSMUST00000218819 1071 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC8.94□□□□□ -0.98
PrkdcP97313 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.94□□□□□ -0.98
PrkdcP97313 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms