Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm10584-201ENSMUST00000207036 2628 ntBASIC21.69■■□□□ 1.06
Cux2P70298 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cux2P70298 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Cux2P70298 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC21.69■■□□□ 1.06
Cux2P70298 Gm32999-201ENSMUST00000192693 562 ntBASIC21.69■■□□□ 1.06
Cux2P70298 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC21.69■■□□□ 1.06
Cux2P70298 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Cux2P70298 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cux2P70298 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cux2P70298 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cux2P70298 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cux2P70298 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cux2P70298 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cux2P70298 Gm12015-201ENSMUST00000117065 843 ntBASIC21.68■■□□□ 1.06
Cux2P70298 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC21.68■■□□□ 1.06
Cux2P70298 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC21.68■■□□□ 1.06
Cux2P70298 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC21.68■■□□□ 1.06
Cux2P70298 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC21.68■■□□□ 1.06
Cux2P70298 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cux2P70298 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cux2P70298 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC21.67■■□□□ 1.06
Cux2P70298 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Gm11450-201ENSMUST00000121144 333 ntBASIC21.67■■□□□ 1.06
Cux2P70298 Gm8365-201ENSMUST00000197334 648 ntBASIC21.67■■□□□ 1.06
Cux2P70298 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cux2P70298 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Fbxl12-205ENSMUST00000140702 1555 ntBASIC21.66■■□□□ 1.06
Cux2P70298 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC21.66■■□□□ 1.06
Cux2P70298 Gm10051-201ENSMUST00000145209 414 ntBASIC21.66■■□□□ 1.06
Cux2P70298 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC21.66■■□□□ 1.06
Cux2P70298 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Gm43416-201ENSMUST00000201916 1015 ntBASIC21.66■■□□□ 1.06
Cux2P70298 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC21.66■■□□□ 1.06
Cux2P70298 Gm45925-201ENSMUST00000218882 744 ntBASIC21.66■■□□□ 1.06
Cux2P70298 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cux2P70298 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cux2P70298 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cux2P70298 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cux2P70298 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC21.65■■□□□ 1.06
Cux2P70298 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cux2P70298 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Cux2P70298 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC21.65■■□□□ 1.06
Cux2P70298 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC21.65■■□□□ 1.06
Cux2P70298 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC21.65■■□□□ 1.06
Cux2P70298 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC21.65■■□□□ 1.06
Cux2P70298 Gm45598-202ENSMUST00000210719 986 ntBASIC21.65■■□□□ 1.06
Cux2P70298 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC21.65■■□□□ 1.06
Cux2P70298 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cux2P70298 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux2P70298 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC21.65■■□□□ 1.06
Cux2P70298 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms