Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdlim4P70271 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm21854-201ENSMUST00000179901 471 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.29□□□□□ -0.6
Pdlim4P70271 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdlim4P70271 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdlim4P70271 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.28□□□□□ -0.6
Pdlim4P70271 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.28□□□□□ -0.6
Pdlim4P70271 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Gm6218-201ENSMUST00000219812 628 ntBASIC11.28□□□□□ -0.6
Pdlim4P70271 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdlim4P70271 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Pdlim4P70271 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms