Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gm13453-201ENSMUST00000118708 357 ntBASIC14.92□□□□□ -0.02
Hmgb1P63158 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Hmgb1P63158 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Gm15770-201ENSMUST00000117498 584 ntBASIC14.91□□□□□ -0.02
Hmgb1P63158 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.91□□□□□ -0.02
Hmgb1P63158 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.91□□□□□ -0.02
Hmgb1P63158 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.91□□□□□ -0.02
Hmgb1P63158 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb1P63158 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.91□□□□□ -0.02
Hmgb1P63158 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.91□□□□□ -0.02
Hmgb1P63158 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm27772-201ENSMUST00000184900 187 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm17837-201ENSMUST00000186435 985 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm18905-201ENSMUST00000205454 928 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.9□□□□□ -0.02
Hmgb1P63158 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms