Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Gm2810-201ENSMUST00000118681 990 ntBASIC12.02□□□□□ -0.49
Sf3b6P59708 Gm6222-201ENSMUST00000120787 396 ntBASIC12.02□□□□□ -0.49
Sf3b6P59708 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.02□□□□□ -0.49
Sf3b6P59708 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.02□□□□□ -0.49
Sf3b6P59708 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.02□□□□□ -0.49
Sf3b6P59708 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.02□□□□□ -0.49
Sf3b6P59708 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b6P59708 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Gm11745-201ENSMUST00000121669 448 ntBASIC12.01□□□□□ -0.49
Sf3b6P59708 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.01□□□□□ -0.49
Sf3b6P59708 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b6P59708 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b6P59708 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b6P59708 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sf3b6P59708 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Gm13365-201ENSMUST00000121188 973 ntBASIC12□□□□□ -0.49
Sf3b6P59708 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Gm45453-201ENSMUST00000211758 853 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms