Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.28■□□□□ 0.04
Rrp1P56183 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.28■□□□□ 0.04
Rrp1P56183 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm9229-201ENSMUST00000222777 126 ntBASIC15.28■□□□□ 0.04
Rrp1P56183 Shd-206ENSMUST00000225145 998 ntBASIC15.28■□□□□ 0.04
Rrp1P56183 Gm8396-201ENSMUST00000057361 823 ntBASIC15.28■□□□□ 0.04
Rrp1P56183 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rrp1P56183 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rrp1P56183 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp1P56183 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rrp1P56183 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp1P56183 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Rrp1P56183 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.27■□□□□ 0.04
Rrp1P56183 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rrp1P56183 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rrp1P56183 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.27■□□□□ 0.04
Rrp1P56183 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.27■□□□□ 0.04
Rrp1P56183 Gm4804-201ENSMUST00000182234 999 ntBASIC15.27■□□□□ 0.04
Rrp1P56183 Gm5312-201ENSMUST00000203728 547 ntBASIC15.27■□□□□ 0.04
Rrp1P56183 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp1P56183 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Rrp1P56183 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rrp1P56183 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Rrp1P56183 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.03
Rrp1P56183 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rrp1P56183 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.26■□□□□ 0.03
Rrp1P56183 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm15693-201ENSMUST00000120470 637 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm24420-201ENSMUST00000176676 59 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm10766-202ENSMUST00000194123 606 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Gm10253-201ENSMUST00000194270 940 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Gm5779-201ENSMUST00000218467 910 ntBASIC15.26■□□□□ 0.03
Rrp1P56183 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.26■□□□□ 0.03
Rrp1P56183 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rrp1P56183 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rrp1P56183 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 170.9 ms