Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm12403-201ENSMUST00000121384 959 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.39□□□□□ -0.27
Pdx1P52946 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Mir6392-201ENSMUST00000184924 108 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm17330-201ENSMUST00000221047 165 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdx1P52946 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pdx1P52946 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Gm13689-201ENSMUST00000119360 685 ntBASIC13.38□□□□□ -0.27
Pdx1P52946 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdx1P52946 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.38□□□□□ -0.27
Pdx1P52946 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.38□□□□□ -0.27
Pdx1P52946 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.38□□□□□ -0.27
Pdx1P52946 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.38□□□□□ -0.27
Pdx1P52946 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pdx1P52946 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdx1P52946 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdx1P52946 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.38□□□□□ -0.27
Pdx1P52946 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.37□□□□□ -0.27
Pdx1P52946 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm29608-201ENSMUST00000190444 463 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm45668-201ENSMUST00000211271 493 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Gm15823-201ENSMUST00000064305 670 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.37□□□□□ -0.27
Pdx1P52946 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdx1P52946 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdx1P52946 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms