Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RoraP51448 Gm38223-201ENSMUST00000194484 695 ntBASIC12.82□□□□□ -0.36
RoraP51448 Gm44397-201ENSMUST00000195950 113 ntBASIC12.82□□□□□ -0.36
RoraP51448 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.82□□□□□ -0.36
RoraP51448 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.82□□□□□ -0.36
RoraP51448 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RoraP51448 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
RoraP51448 Gm24447-201ENSMUST00000083977 338 ntBASIC12.82□□□□□ -0.36
RoraP51448 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RoraP51448 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RoraP51448 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.81□□□□□ -0.36
RoraP51448 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
RoraP51448 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Gm12390-201ENSMUST00000117897 397 ntBASIC12.81□□□□□ -0.36
RoraP51448 Gm11814-201ENSMUST00000119515 929 ntBASIC12.81□□□□□ -0.36
RoraP51448 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.81□□□□□ -0.36
RoraP51448 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
RoraP51448 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RoraP51448 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Gm27486-201ENSMUST00000184923 80 ntBASIC12.81□□□□□ -0.36
RoraP51448 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RoraP51448 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.81□□□□□ -0.36
RoraP51448 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.81□□□□□ -0.36
RoraP51448 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RoraP51448 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.8□□□□□ -0.36
RoraP51448 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RoraP51448 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.8□□□□□ -0.36
RoraP51448 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm11425-201ENSMUST00000119608 498 ntBASIC12.8□□□□□ -0.36
RoraP51448 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RoraP51448 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.8□□□□□ -0.36
RoraP51448 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.8□□□□□ -0.36
RoraP51448 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm9396-201ENSMUST00000076703 567 ntBASIC12.8□□□□□ -0.36
RoraP51448 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RoraP51448 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.8□□□□□ -0.36
RoraP51448 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RoraP51448 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.8□□□□□ -0.36
RoraP51448 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms