Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.09□□□□□ -0.15
LmnaP48678 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.09□□□□□ -0.15
LmnaP48678 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LmnaP48678 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.09□□□□□ -0.15
LmnaP48678 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.09□□□□□ -0.15
LmnaP48678 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
LmnaP48678 Mir125a-201ENSMUST00000083545 68 ntBASIC14.09□□□□□ -0.15
LmnaP48678 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LmnaP48678 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LmnaP48678 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LmnaP48678 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LmnaP48678 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
LmnaP48678 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
LmnaP48678 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LmnaP48678 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LmnaP48678 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LmnaP48678 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LmnaP48678 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.08□□□□□ -0.16
LmnaP48678 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LmnaP48678 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.08□□□□□ -0.16
LmnaP48678 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.08□□□□□ -0.16
LmnaP48678 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LmnaP48678 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.08□□□□□ -0.16
LmnaP48678 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.08□□□□□ -0.16
LmnaP48678 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LmnaP48678 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LmnaP48678 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LmnaP48678 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.07□□□□□ -0.16
LmnaP48678 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
LmnaP48678 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.07□□□□□ -0.16
LmnaP48678 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LmnaP48678 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.07□□□□□ -0.16
LmnaP48678 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.07□□□□□ -0.16
LmnaP48678 Gm7399-201ENSMUST00000032395 858 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms