Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx1-2P42580 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx1-2P42580 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx1-2P42580 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm12585-201ENSMUST00000117307 290 ntBASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm13223-201ENSMUST00000118609 747 ntBASIC16.65■□□□□ 0.26
Nkx1-2P42580 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm13385-201ENSMUST00000121089 220 ntBASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.65■□□□□ 0.26
Nkx1-2P42580 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.65■□□□□ 0.26
Nkx1-2P42580 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Nkx1-2P42580 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx1-2P42580 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx1-2P42580 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.64■□□□□ 0.25
Nkx1-2P42580 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx1-2P42580 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gm4804-201ENSMUST00000182234 999 ntBASIC16.63■□□□□ 0.25
Nkx1-2P42580 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.63■□□□□ 0.25
Nkx1-2P42580 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx1-2P42580 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx1-2P42580 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx1-2P42580 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx1-2P42580 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx1-2P42580 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx1-2P42580 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms