Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim30aP15533 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim30aP15533 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim30aP15533 Gm44719-201ENSMUST00000206404 149 ntBASIC14.79□□□□□ -0.04
Trim30aP15533 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim30aP15533 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim30aP15533 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim30aP15533 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim30aP15533 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim30aP15533 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.78□□□□□ -0.04
Trim30aP15533 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.78□□□□□ -0.04
Trim30aP15533 Gm15372-201ENSMUST00000120729 834 ntBASIC14.78□□□□□ -0.04
Trim30aP15533 Gm12882-201ENSMUST00000121696 517 ntBASIC14.78□□□□□ -0.04
Trim30aP15533 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trim30aP15533 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.78□□□□□ -0.04
Trim30aP15533 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim30aP15533 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim30aP15533 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim30aP15533 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim30aP15533 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.77□□□□□ -0.04
Trim30aP15533 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Trim30aP15533 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trim30aP15533 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim30aP15533 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim30aP15533 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim30aP15533 Gm25016-201ENSMUST00000158399 131 ntBASIC14.77□□□□□ -0.05
Trim30aP15533 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim30aP15533 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Trim30aP15533 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim30aP15533 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim30aP15533 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.77□□□□□ -0.05
Trim30aP15533 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim30aP15533 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms