Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
ApoeP08226 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.81□□□□□ -0.36
ApoeP08226 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.81□□□□□ -0.36
ApoeP08226 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.81□□□□□ -0.36
ApoeP08226 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.81□□□□□ -0.36
ApoeP08226 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.81□□□□□ -0.36
ApoeP08226 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.81□□□□□ -0.36
ApoeP08226 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Gm45612-201ENSMUST00000211320 160 ntBASIC12.81□□□□□ -0.36
ApoeP08226 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.81□□□□□ -0.36
ApoeP08226 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.81□□□□□ -0.36
ApoeP08226 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ApoeP08226 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ApoeP08226 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.8□□□□□ -0.36
ApoeP08226 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ApoeP08226 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ApoeP08226 Mir874-201ENSMUST00000104769 76 ntBASIC12.8□□□□□ -0.36
ApoeP08226 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.8□□□□□ -0.36
ApoeP08226 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ApoeP08226 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.8□□□□□ -0.36
ApoeP08226 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.8□□□□□ -0.36
ApoeP08226 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.8□□□□□ -0.36
ApoeP08226 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.8□□□□□ -0.36
ApoeP08226 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ApoeP08226 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.79□□□□□ -0.36
ApoeP08226 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ApoeP08226 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.79□□□□□ -0.36
ApoeP08226 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ApoeP08226 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.79□□□□□ -0.36
ApoeP08226 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.79□□□□□ -0.36
ApoeP08226 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 Gm18049-201ENSMUST00000208909 581 ntBASIC12.79□□□□□ -0.36
ApoeP08226 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.79□□□□□ -0.36
ApoeP08226 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms