Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Hoxa3P02831 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.37□□□□□ -0.59
Hoxa3P02831 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxa3P02831 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.36□□□□□ -0.59
Hoxa3P02831 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.36□□□□□ -0.59
Hoxa3P02831 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa3P02831 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.36□□□□□ -0.59
Hoxa3P02831 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa3P02831 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.35□□□□□ -0.59
Hoxa3P02831 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm11524-201ENSMUST00000119349 807 ntBASIC11.35□□□□□ -0.59
Hoxa3P02831 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm26464-201ENSMUST00000157094 305 ntBASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm24420-201ENSMUST00000176676 59 ntBASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms