Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
BckdkO55028 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.58□□□□□ -0.4
BckdkO55028 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.58□□□□□ -0.4
BckdkO55028 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.58□□□□□ -0.4
BckdkO55028 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.58□□□□□ -0.4
BckdkO55028 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.58□□□□□ -0.4
BckdkO55028 Gm44608-201ENSMUST00000206827 855 ntBASIC12.58□□□□□ -0.4
BckdkO55028 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Gm6180-201ENSMUST00000065243 498 ntBASIC12.58□□□□□ -0.4
BckdkO55028 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BckdkO55028 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.58□□□□□ -0.4
BckdkO55028 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BckdkO55028 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.57□□□□□ -0.4
BckdkO55028 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.57□□□□□ -0.4
BckdkO55028 Gm11478-201ENSMUST00000117851 599 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
BckdkO55028 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BckdkO55028 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BckdkO55028 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BckdkO55028 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.57□□□□□ -0.4
BckdkO55028 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.57□□□□□ -0.4
BckdkO55028 Gm18624-201ENSMUST00000220966 658 ntBASIC12.57□□□□□ -0.4
BckdkO55028 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BckdkO55028 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.57□□□□□ -0.4
BckdkO55028 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BckdkO55028 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.57□□□□□ -0.4
BckdkO55028 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BckdkO55028 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
BckdkO55028 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.56□□□□□ -0.4
BckdkO55028 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.56□□□□□ -0.4
BckdkO55028 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
BckdkO55028 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.56□□□□□ -0.4
BckdkO55028 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BckdkO55028 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Gm45384-201ENSMUST00000210451 277 ntBASIC12.56□□□□□ -0.4
BckdkO55028 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.56□□□□□ -0.4
BckdkO55028 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms