Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Gm16479-201ENSMUST00000121706 932 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Gm27516-201ENSMUST00000184237 98 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Olfr284-202ENSMUST00000206647 966 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11236J3QMS7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11236J3QMS7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11236J3QMS7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11236J3QMS7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm13342-201ENSMUST00000121055 207 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm13786-201ENSMUST00000122371 333 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm7783-201ENSMUST00000204795 781 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm4768-201ENSMUST00000206199 686 ntBASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm11236J3QMS7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Gm11591-201ENSMUST00000120063 702 ntBASIC14.07□□□□□ -0.16
Gm11236J3QMS7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Gm6222-202ENSMUST00000182143 629 ntBASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Gm29396-201ENSMUST00000185659 716 ntBASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Gm9368-201ENSMUST00000219348 831 ntBASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11236J3QMS7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms