Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Gm3287-205ENSMUST00000228893 1332 ntBASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcf11G3X9Z4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Gm27320-201ENSMUST00000184892 109 ntBASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Gm8099-201ENSMUST00000200510 742 ntBASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Gm5639-201ENSMUST00000122305 2403 ntBASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Pcf11G3X9Z4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gm11222-201ENSMUST00000119005 738 ntBASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gm18916-201ENSMUST00000198264 1246 ntBASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcf11G3X9Z4 Gm12012-201ENSMUST00000118857 1066 ntBASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Gm11531-201ENSMUST00000117614 555 ntBASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Gm25043-201ENSMUST00000158604 212 ntBASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Gm38092-201ENSMUST00000195600 653 ntBASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcf11G3X9Z4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 AC154595.3-201ENSMUST00000224579 384 ntBASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Gm5989-201ENSMUST00000096092 2077 ntBASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcf11G3X9Z4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms