Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm13392-201ENSMUST00000117708 150 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm8213-201ENSMUST00000118191 441 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm12403-201ENSMUST00000121384 959 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm17420-201ENSMUST00000164753 153 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Proscos-202ENSMUST00000178990 666 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.33□□□□□ -0.28
Srp54bE9PXC0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Srp54bE9PXC0 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Gm10156-201ENSMUST00000122364 462 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Gm10478-201ENSMUST00000084451 396 ntBASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Srp54bE9PXC0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srp54bE9PXC0 Gm16177-201ENSMUST00000120728 718 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms