Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.6□□□□□ -0.23
Gm28043E0CXC2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.59□□□□□ -0.23
Gm28043E0CXC2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm27533-201ENSMUST00000183800 152 ntBASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm28043E0CXC2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm28043E0CXC2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gm28043E0CXC2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm15653-201ENSMUST00000119247 907 ntBASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm28043E0CXC2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms