Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Gm3096-201ENSMUST00000185770 364 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scn7aB1AYL1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gm25700-201ENSMUST00000177693 110 ntBASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.06■□□□□ 0.32
Scn7aB1AYL1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn7aB1AYL1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm26956-201ENSMUST00000182176 986 ntBASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm3786-201ENSMUST00000202659 378 ntBASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn7aB1AYL1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Gm23200-201ENSMUST00000104379 132 ntBASIC17.04■□□□□ 0.32
Scn7aB1AYL1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Gm19994-201ENSMUST00000217086 586 ntBASIC17.04■□□□□ 0.32
Scn7aB1AYL1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn7aB1AYL1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms