Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Gm9522-201ENSMUST00000182394 926 ntBASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb3Q9ERD7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm12859-201ENSMUST00000117834 427 ntBASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.48□□□□□ -0.25
Tubb3Q9ERD7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb3Q9ERD7 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms