Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm4804-201ENSMUST00000182234 999 ntBASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm17795-201ENSMUST00000214505 757 ntBASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rtp4Q9ER80 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Gm12341-201ENSMUST00000119724 503 ntBASIC12.71□□□□□ -0.37
Rtp4Q9ER80 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Gm37714-201ENSMUST00000194742 342 ntBASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Gm43433-201ENSMUST00000196573 481 ntBASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Gm5279-201ENSMUST00000199575 745 ntBASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rtp4Q9ER80 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rtp4Q9ER80 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Gm15678-201ENSMUST00000117573 960 ntBASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms