Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm2445-201ENSMUST00000182798 989 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm37497-201ENSMUST00000195830 798 ntBASIC13.25□□□□□ -0.29
Rrp8Q9DB85 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp8Q9DB85 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gm11618-201ENSMUST00000117946 267 ntBASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gm13342-201ENSMUST00000121055 207 ntBASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Mir8109-201ENSMUST00000184375 117 ntBASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp8Q9DB85 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm7584-201ENSMUST00000175829 940 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm26927-201ENSMUST00000182385 965 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm7783-201ENSMUST00000204795 781 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm18935-201ENSMUST00000212692 664 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm45930-201ENSMUST00000221330 292 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gm10146-201ENSMUST00000072739 309 ntBASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms