Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp5Q9D7S9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp5Q9D7S9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp5Q9D7S9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Chmp5Q9D7S9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp5Q9D7S9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Gm33320-201ENSMUST00000192232 530 ntBASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp5Q9D7S9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gm5264-201ENSMUST00000190584 848 ntBASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp5Q9D7S9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm8927-201ENSMUST00000181978 981 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Gm3222-201ENSMUST00000071282 990 ntBASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp5Q9D7S9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms