Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Mir6990-201ENSMUST00000183724 91 ntBASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Gm43125-201ENSMUST00000201724 730 ntBASIC13.97□□□□□ -0.17
Snf8Q9CZ28 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snf8Q9CZ28 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Gm2756-201ENSMUST00000195851 400 ntBASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snf8Q9CZ28 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Snf8Q9CZ28 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Snf8Q9CZ28 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
Snf8Q9CZ28 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snf8Q9CZ28 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms