Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 BC001981-202ENSMUST00000191393 1545 ntBASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm44719-201ENSMUST00000206404 149 ntBASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim13Q9CYB0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim13Q9CYB0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gm14494-201ENSMUST00000118786 435 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 AA543401-201ENSMUST00000164248 1269 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 AA619741-201ENSMUST00000195095 646 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim13Q9CYB0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms